The sequence and X-ray structure of the trypsin from Fusarium oxysporum.
نویسندگان
چکیده
The trypsin from Fusarium oxysporum is equally homologous to trypsins from Streptomyces griseus, Streptomyces erythraeus and to bovine trypsin. A DFP (diisopropylfluorophosphate) inhibited form of the enzyme has been crystallized from 1.4 M Na2SO4, buffered with citrate at pH 5.0-5.5. The crystals belong to space group P2(1) with cell parameters a = 33.43 A, b = 67.65 A, c = 39.85 A and beta = 107.6 degrees. There is one protein molecule in the asymmetric unit. X-ray diffraction data to a resolution of 1.8 A were collected on film using synchrotron radiation. The structure was solved by molecular replacement using models of bovine and S. griseus trypsins and refined to an R-factor of 0.141. The overall fold is similar to other trypsins, with some insertions and deletions. There is no evidence of the divalent cation binding sites seen in other trypsins. The covalently bound inhibitor molecule is clearly visible.
منابع مشابه
Genetic structure of Fusarium oxysporum f. sp. ciceri populations from chickpea in Ilam province, Iran
Chickpea (Cicer arietinum L.) is one of the most important legume crops in Iran. Wilt disease caused by Fusarium oxysporum f. sp. ciceri, is the most important soil-borne disease of chickpea in the world. This disease caused high losses in different regions during recent years. Simple sequence repeat (SSR) were used to estimate genetic diversity in 114 of F. oxysporum isolates from six counties...
متن کاملStructure of inhibited trypsin from Fusarium oxysporum at 1.55 A.
The structure of trypsin from the fungus Fusarium oxysporum has been refined at 1.55 A resolution by restrained least-squares minimization to an R-factor of 14.4%. The data were recorded from a single-crystal on the X31 beamline at EMBL, Hamburg, using a locally developed image-plate scanner. The final model consists of 1557 protein atoms, 400 water molecules, one molecule of isopropanol and on...
متن کاملFIRST CASE REPORT OF WHITE SUPERFICIAL ONYCHOMYCOSIS DUE TO FUSARIUM OXYSPORUM IN IRAN
This paper presents for the first time the isolation of Fusarium oxysporum from the toenails of a man from Tehran. The fungus was demonstrated in KOH mounts and was isolated repeatedly from his nail scrapings over a 2 month period. Published reviews on onychomycosis in Iran have not revealed any cases of white superficial onychomycosis due to Fusarium oxysporum to date
متن کاملForet1, a reverse transcriptase-like sequence in the filamentous fungus Fusarium oxysporum.
We report here the isolation of Foret1, a repeated DNA sequence cloned from the fungal plant pathogen Fusarium oxysporum. This clone exhibits a high degree of sequence similarity with the retroviral pol genes. Sequences homologous to protease, reverse transcriptase, ribonuclease H are found in that order. The overall structure is homologous to the 'gypsy' class of LTR-retrotransposons. Its simi...
متن کاملPECTIC ENZYME PATTERNS OF FUSARIUM OXYSPORUM VIRULENT ISOLATES FROM CHICKPEA IN IRAN
The pectic enzymes produced in vitro by 8 isolates (5 Highly virulent and 3 Weakly virulent) of Fusarium oxysporum , were detected by spectrophotometry, and characterized by polyacrylamide gel electrophoresis with substrate-containing gels (zymogram). Analysis of the polygalacturonase (PG) isozyme banding patterns (zymogram) identified two distinct phenotypes among the isolates from chickpea (C...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- Protein engineering
دوره 6 4 شماره
صفحات -
تاریخ انتشار 1993